BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026B11SP1|AL428505
(815 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1675 1535 0.0
>3x_Contig1675
Length = 13954
Score = 1535 bits (765), Expect = 0.0
Identities = 795/815 (97%)
Strand = Plus / Plus
Query: 1 gatcacttaacctagtgggcagttagaccaatagtgttgcagtagaaaataaaaattagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4798 gatcacttaacctagtgggcagttagaccaatagtgttgcagtagaaaataaaaattagc 4857
Query: 61 ttgcacgtcatctgatatacactaatggggtttttcactgatcatccatatacttcggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4858 ttgcacgtcatctgatatacactaatggggtttttcactgatcatccatatacttcggtt 4917
Query: 121 acggaatccatcaataaggccgttatatcagaaaatgcaacgttagaagttgaattagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4918 acggaatccatcaataaggccgttatatcagaaaatgcaacgttagaagttgaattagga 4977
Query: 181 aacatactgcagttgattcgaactggtgacaccgacaccaatcaagtagaagcagctagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4978 aacatactgcagttgattcgaactggtgacaccgacaccaatcaagtagaagcagctagg 5037
Query: 241 gcgattagaaaacgattaaagcatggtgacctgtaccaacaatcaagggcattggrtcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5038 gcgattagaaaacgattaaagcatggtgacctgtaccaacaatcaagggcattggatcta 5097
Query: 301 ttaaacttatttgtttcccagctcatccatttaccattgttctattccgatttcagattg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5098 ttaaacttatttgtttcccagctcatccatttaccattgttctattccgatttcagattg 5157
Query: 361 attaacgttcttctggatatgtcttctaattcaggggaatacccaaaacaaatttcaaga 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5158 attaacgttcttctggatatgtcttctaattcagggaaatacccaaaacaaatttcaaga 5217
Query: 421 raatgtacatgtkatctaatagggkggtatcaatatttggsaagtcaccaggaggttgaa 480
||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 5218 aaatgtacatgttatctaatagggtggtatcaatatttggcaagtcaccaggaggttgaa 5277
Query: 481 ggttttgagatgctatttrctgtttgtgaraaggcttacvaaaacaagaraagacatacc 540
|||||||| ||||||||| |||||||||| ||||||||| ||||||||| ||||||||||
Sbjct: 5278 ggttttgaaatgctatttactgtttgtgaaaaggcttacaaaaacaagaaaagacatacc 5337
Query: 541 aaggtcatgaacaaatcttatcagavgagraagagagcattacctcavttttbgagtgac 600
||||||||||||||||||||||||| || |||| |||||||||||| |||| ||||||
Sbjct: 5338 aaggtcatgaacaaatcttatcagaagaaaaagaaagcattacctcaatttttaagtgac 5397
Query: 601 actgccgatcgadgagctgtcaccgctgatgaacggtatgggattccaagaattgacctt 660
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5398 actgccgatcgaagagctgtcaccgctgatgaacggtatgggattccaagaattgacctt 5457
Query: 661 gagaaggaagctcctaagattaawctattgattagcgactccttagaaaccgcagtgtct 720
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 5458 gagaaggaagctcctaagattaaactattgattagcgactccttagaaaccgcagtgtct 5517
Query: 721 ctatcgaatgctttgttggcaattccagctcatagtaagtccaccgacagtgagctgtgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5518 ctatcgaatgctttgttggcaattccagctcatagtaagtccaccgacagtgagctgtgt 5577
Query: 781 acggccaaattcgttcaagcaagagcattgagaag 815
|||||||||||||||||||||||||||||||||||
Sbjct: 5578 acggccaaattcgttcaagcaagagcattgagaag 5612
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4671
Number of Sequences: 1807
Number of extensions: 4671
Number of successful extensions: 83
Number of sequences better than 1.0e-20: 1
length of query: 815
length of database: 10,358,551
effective HSP length: 16
effective length of query: 799
effective length of database: 10,329,639
effective search space: 8253381561
effective search space used: 8253381561
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)